funRiceGenes
2024-03-30T17:05:55+00:00
venyao@qq.com
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ZFP252,RZF71
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os12g39400
Information
Publication
Genbank accession number
Key message
We previously identified a salt and drought stress-responsive TFIIIA-type zinc finger protein gene ZFP252 from rice
We found that overexpression of ZFP252 in rice increased the amount of free proline and soluble sugars, elevated the expression of stress defense genes and enhanced rice tolerance to salt and drought stresses, as compared with ZFP252 antisense and non-transgenic plants
Our findings suggest that ZFP252 plays an important role in rice response to salt and drought stresses and is useful in engineering crop plants with enhanced tolerance to salt and drought stresses
Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.)
These results indicated that the RZF71 may play an important role in rice responses to salt and osmotic stresses as a transcription factor
The semi-quantitative RT-PCR assay showed RZF71 was strongly induced by high-salinity and 20% PEG6000 treatments, but not regulated by low temperature and ABA (abscisic acid) treatments
The expression profiling showed that RZF71 was constitutively expressed in roots, culms, leaves, and flowering spikes
A rice zinc-finger protein gene, RZF71, encoding the C2H2-type zinc-finger transcription factor was isolated from rice
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ZOS8-11
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os08g40560
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Genbank accession number
Key message
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ZL16
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os08g12840
Information
Publication
Genbank accession number
Key message
ZL16 was ubiquitously expressed in various plant organs, with a pronounced level in the young leaf
The zl16 mutant showed chlorotic abnormalities in the transverse sectors of the young leaves of seedlings
The use of transmission electron microscopy (TEM) demonstrated that dramatic defects occurred in variegated zl16 leaves during the early development of a chloroplast
A subcellular localization experiment indicated that ZL16 was targeted in the chloroplast
Furthermore, we analyzed the expression of some nuclear genes involved in chloroplast development, and found they were altered in the zl16 mutant
Map-based cloning revealed that ZL16 encodes a -hydroxyacyl-ACP dehydratase (HAD) involved in de novo fatty acid synthesis
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ZFP245
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os07g39970
Information
Publication
Genbank accession number
Key message
Overproduction of ZFP245 enhanced the activities of reactive oxygen species-scavenging enzymes under stress conditions and increased the tolerance of rice seedlings to oxidative stress
However, ZFP245 was not regulated by high salt or abscisic acid treatment
The semi-quantitative-RT-PCR assay revealed ZFP245 was strongly induced after 6 h exposure to cold and drought stresses, and then reduced to the baseline
Taken together, ZFP245, as the first identified C2H2-type zinc finger protein involved in stress response in monocots probably plays a role as a transcription regulator in plant cold and drought responses through an ABA-independent pathway
A C2H2-type zinc finger protein gene ZFP245 was cloned by RT-PCR approach from cold treated rice seedlings
Our data suggest that ZFP245 may contribute to the tolerance of rice plants to cold and drought stresses by regulating proline levels and reactive oxygen species-scavenging activities, and therefore may be useful for developing transgenic crops with enhanced tolerance to abiotic stress
ZFP245 is a cold- and drought-responsive gene that encodes a zinc finger protein in rice
Transgenic rice plants overexpressing ZFP245 were generated and found to display high tolerance to cold and drought stresses
Increased tolerance of rice to cold, drought and oxidative stresses mediated by the overexpression of a gene that encodes the zinc finger protein ZFP245
Tissue expression analysis showed that ZFP245 was constitutively expressed in various rice tissues including roots, stems, leaves and spikes
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ZFP177
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os07g07350
Information
Publication
Genbank accession number
Key message
These results suggested that ZFP177 might play crucial but differential roles in plant responses to various abiotic stresses
Through microarray analysis, it was found that four genes (ZFP177, ZFP181, ZFP176, ZFP173), two genes (ZFP181 and ZFP176) and one gene (ZFP157) were significantly induced by cold, drought and H(2)O(2) treatments, respectively
Overexpression of ZFP177 in tobacco conferred tolerance of transgenic plants to both low and high temperature stresses, but increased sensitivity to salt and drought stresses
Further expression analysis showed that ZFP177 was responsive to both cold and heat stresses, but down-regulated by salt
Expression analysis of rice A20/AN1-type zinc finger genes and characterization of ZFP177 that contributes to temperature stress tolerance
The subcellular localization assay indicated that ZFP177 was localized in cytoplasm in tobacco leaf and root cells
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ZN
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os06g02580
Information
Publication
Genbank accession number
Key message
Virus-induced gene silencing of a ZN homolog in Nicotiana benthamiana causes leaf variegation with sporadic green/yellow sectors, indicating that ZN is essential for chloroplast biogenesis during early leaf development
Together, we propose that ZN is required for protecting developing chloroplasts, especially during the assembly of thylakoid protein complexes, from incidental light after darkness
Connection
OsMTP11 , ZN , Identification of a rice metal tolerance protein OsMTP11 as a manganese transporter. , Real time RT-PCR analysis demonstrated OsMTP11 expression was substantially enhanced following 4 h under Cd, Zn, Ni, and Mn treatments, suggesting possible roles of OsMTP11 involvement in heavy metal stress responses
OsMTP11 , ZN , Identification of a rice metal tolerance protein OsMTP11 as a manganese transporter. , DNA methylation assays of genomic DNA in rice treated with Cd, Zn, Ni, and Mn revealed that decreased DNA methylation levels were present in the OsMTP11 promoter region, which was consistent with OsMTP11 induced-expression patterns resulting from heavy metal stress
OsMTP11 , ZN , OsMTP11 is localised at the Golgi and contributes to Mn tolerance. , OsMTP11 partially rescues the Mn-hypersensitivity of the pmr1 yeast mutant but only slightly alleviates the Zn sensitivity of the zrc1 cot1 yeast mutant
OsMTP11 , ZN , OsMTP11 is localised at the Golgi and contributes to Mn tolerance. , Overall, these results suggest that OsMTP11 predominantly functions as a Mn-transporting CDF with lower affinity for Zn
OsZIP7a~OsZIP7 , ZN , Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7. , Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7.
OsZIP7a~OsZIP7 , ZN , Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7. , OsZIP7 expression in Arabidopsis resulted in a 25% increase in shoot Zn concentrations compared to non-transformed plants
OsZIP7a~OsZIP7 , ZN , Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7. , We further characterized OsZIP7 and showed that it is localized to the plasma membrane and is able to complement Zn transport defective (but not Fe defective) yeast mutants
OsZIP7a~OsZIP7 , ZN , Elemental Profiling of Rice FOX Lines Leads to Characterization of a New Zn Plasma Membrane Transporter, OsZIP7. , Our results indicate that OsZIP7 is a good candidate for developing Zn biofortified rice
OsHMA7 , ZN , Down regulation of a heavy metal transporter gene influences several domestication traits and grain Fe-Zn content in rice. , We identified two alleles 261 and 284 of a Gramineae-specific heavy metal transporter gene OsHMA7 by analyzing expression patterns and sequences of genes within QTLs for high Fe & Zn, in Madhukar x Swarna recombinant inbred lines (RILs) with high (HL) or low (LL) grain Fe & Zn
OsHMA7 , ZN , Down regulation of a heavy metal transporter gene influences several domestication traits and grain Fe-Zn content in rice. , Knocking down expression of OsHMA7 by RNAi silencing of endogenous gene resulted in plants with altered domestication traits such as plant height, tiller number, panicle size and architecture, grain color, shape, size, grain shattering, heading date and increased sensitivity to Fe and Zn deficiency
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice.
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , Here, we found that OsHMA3, a tonoplast-localized transporter for Zn/Cd plays an important role in Zn homeostasis in rice
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , By comparing rice accessions with functional allele of OsHMA3 with accessions with loss of function allele of OsHMA3, we found that accessions with functional OsHMA3 showed higher tolerance to high Zn than those with non-functional OsHMA3 based on root elongation test
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , A 67Zn-labeling experiment showed that accessions with loss of function of OsHMA3 had lower Zn accumulation in the roots although similar Zn concentration was found in the shoots compared with accessions with functional OsHMA3
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , When exposed to Zn-free solution, the Zn concentration in the root cell sap was rapidly decreased in the accessions with functional OsHMA3, but less changed in the accessions with non-functional OsHMA3
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , A mobility experiment showed that more Zn in the roots was translocated to the shoots in the accessions with functional OsHMA3 compared with the accessions with non-functional OsHMA3
qCdT7~OsHMA3 , ZN , A tonoplast-localized OsHMA3 plays an important role in maintaining Zn homeostasis in rice. , Taking together, our results indicate that OsHMA3 plays an important role in both Zn detoxification and storage by sequestering Zn into the vacuoles in rice roots, depending on Zn concentrations in the environment
OsZIP7a~OsZIP7 , ZN , OsZIP7 functions in xylem loading in roots and inter-vascular transfer in nodes to deliver Zn/Cd to grain in rice. , In this study, we functionally characterised in planta the rice (Oryza sativa) transporter OsZIP7, which encodes a plasma membrane-localised protein with influx transport activity for both Zn and Cd
OsZIP7a~OsZIP7 , ZN , OsZIP7 functions in xylem loading in roots and inter-vascular transfer in nodes to deliver Zn/Cd to grain in rice. , OsZIP7 knockout resulted in retention of Zn and Cd in roots and basal nodes, which hindered their upward delivery to upper nodes and brown rice
OsZIP7a~OsZIP7 , ZN , OsZIP7 functions in xylem loading in roots and inter-vascular transfer in nodes to deliver Zn/Cd to grain in rice. , Thus, OsZIP7 plays an integral role in xylem loading in roots and inter-vascular transfer in nodes to preferentially deliver Zn and Cd to developing tissues and rice grains
OsZIP1 , ZN , OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice. , In this report, we provided evidence that OsZIP1 is a metal-detoxified transporter through preventing excess Zn, Cu and Cd accumulation in rice
OsZIP1 , ZN , OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice. , OsZIP1 is abundantly expressed in roots throughout the life span and sufficiently induced by excess Zn, Cu and Cd but not by Mn and Fe at transcriptional and translational levels
OsZIP1 , ZN , OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice. , The yeast (Saccharomyces cerevisiae) complementation test shows that expression of OsZIP1 reduced Zn accumulation
OsZIP1 , ZN , OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice. , These results suggest OsZIP1 is able to function as a metal exporter in rice when Zn, Cu and Cd are excess in environment
OsZIP1 , ZN , OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice. , OsZIP1 is a transporter that is required for detoxification of excess Zn, Cu and Cd in rice
OsLCT1 , ZN , Co-expression of multiple heavy metal transporters changes the translocation, accumulation, and potential oxidative stress of Cd and Zn in rice Oryza sativa. , The OsHMA2, OsLCT1 and OsZIP3 transporters were all involved in zinc (Zn) and cadmium (Cd) transport
Ospdr9~OsABCG36 , ZN , The ABC transporter OsABCG36 is required for Cd tolerance in rice. , Knockout of OsABCG36 resulted in increased Cd accumulation in root cell sap, and enhanced Cd sensitivity, but did not affect the tolerance to other metals including Al, Zn, Cu, and Pb
Ospdr9~OsABCG36 , ZN , The ABC transporter OsABCG36 is required for Cd tolerance in rice. , Heterologous expression of OsABCG36 in yeast showed an efflux activity for Cd, but not for Zn
OsVMT~OsZIFL12 , ZN , A vacuolar phytosiderophore transporter alters iron and zinc accumulation in polished rice grains. , OsVMT is highly expressed in the parenchyma cell bridges of node I where Fe and Zn are highly deposited
OsVMT~OsZIFL12 , ZN , A vacuolar phytosiderophore transporter alters iron and zinc accumulation in polished rice grains. , Taken together, our results indicate that OsVMT is involved in sequestering DMA into the vacuoles and that knockout of this gene enhances accumulation of Fe and Zn in polished rice grains through DMA-increased solubilization of Fe and Zn deposited in the node
OsCASP1 , ZN , OsCASP1 is required for Casparian strip formation at endodermal cells of rice roots for selective uptake of mineral elements. , Mineral analysis showed that the oscasp1 mutants accumulated higher Ca, but less Mn, Zn, Fe, Cd and As in the shoots compared with the wild type
OsZIP9 , ZN , ZINC TRANSPORTER5 and ZINC TRANSPORTER9 function synergistically in zinc/cadmium uptake. , In this study, we functionally characterized two Zn transporter genes in rice (Oryza sativa), ZINC TRANSPORTER5 (OsZIP5) and ZINC TRANSPORTER9 (OsZIP9), which are tandem duplicates and act synergistically in Zn/Cd uptake
OsZIP9 , ZN , ZINC TRANSPORTER5 and ZINC TRANSPORTER9 function synergistically in zinc/cadmium uptake. , The expression profiles of OsZIP5 and OsZIP9 overlap in the root epidermis and respond to the local Zn status in the root
OsZIP9 , ZN , ZINC TRANSPORTER5 and ZINC TRANSPORTER9 function synergistically in zinc/cadmium uptake. , However, OsZIP9 is also regulated by systemic signals of Zn status from the shoot
OsZIP5 , ZN , ZINC TRANSPORTER5 and ZINC TRANSPORTER9 function synergistically in zinc/cadmium uptake. , In this study, we functionally characterized two Zn transporter genes in rice (Oryza sativa), ZINC TRANSPORTER5 (OsZIP5) and ZINC TRANSPORTER9 (OsZIP9), which are tandem duplicates and act synergistically in Zn/Cd uptake
OsZIP5 , ZN , ZINC TRANSPORTER5 and ZINC TRANSPORTER9 function synergistically in zinc/cadmium uptake. , The expression profiles of OsZIP5 and OsZIP9 overlap in the root epidermis and respond to the local Zn status in the root
OsZIP9 , ZN , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions. , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions.
OsZIP9 , ZN , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions. , Here, we found that OsZIP9, a member of ZIP (ZRT, IRT-like protein) family, is involved in Zn uptake in rice under Zn-limited conditions
OsZIP9 , ZN , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions. , OsZIP9 was mainly localized to the plasma membrane and showed transport activity for Zn in yeast
OsZIP9 , ZN , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions. , For plants grown in a hydroponic solution with low Zn concentration, knockout of OsZIP9 significantly reduced plant growth, which was accompanied by decreased Zn concentrations in both the root and shoot
OsZIP9 , ZN , The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions. , Combined, these results indicate that OsZIP9 localized at the root exodermis and endodermis functions as an influx transporter of Zn and contributes to Zn uptake under Zn-limited conditions in rice
OsZIP9 , ZN , A high activity zinc transporter OsZIP9 mediates zinc uptake in rice. , Here, we report that a member of ZIP (ZRT, IRT-like protein) family, OsZIP9, functions in Zn uptake in rice
OsZIP9 , ZN , A high activity zinc transporter OsZIP9 mediates zinc uptake in rice. , Yeast-expressed OsZIP9 showed much higher Zn influx transport activity than other rice ZIP proteins in a wide range of Zn concentrations
OsZIP9 , ZN , A high activity zinc transporter OsZIP9 mediates zinc uptake in rice. , OsZIP9 knockout rice plants showed a significant reduction in growth at low Zn concentration, but could be rescued by high Zn supply
OsZIP9 , ZN , A high activity zinc transporter OsZIP9 mediates zinc uptake in rice. , Natural variation of OsZIP9 expression level is highly associated with Zn content in milled grain among rice varieties in the germplasm collection
OsZIP9 , ZN , A high activity zinc transporter OsZIP9 mediates zinc uptake in rice. , Taken together, these results show that OsZIP9 is an important influx transporter responsible for uptake of Zn and Co from external media into root cells
OsbZIP50~OsbZIP74 , ZN , Rice F-bZIP transcription factors regulate the zinc deficiency response , Ectopic expression of OsbZIP50 in Arabidopsis significantly increases plant zinc accumulation under control zinc supply, suggesting an altered Zn sensing in OsbZIP50
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , Physiological responses of rice ( Oryza sativa L.) oszip7 loss-of-function plants exposed to varying Zn concentrations
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , Here we describe a Tos17 loss-of-function line for the Zn plasma membrane transporter OsZIP7 (oszip7)
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , We showed that the absence of functional OsZIP7 leads to deregulated Zn partitioning, increasing Zn accumulation in roots but decreasing in shoots and seeds
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , We also demonstrated that, upon Zn deficiency, oszip7 plants slightly increase their photosynthetic performance, suggesting that these plants might be primed for Zn deficiency which makes them more tolerant
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , On the other hand, we found that Zn excess is more deleterious to oszip7 plants compared to wild type, which may be linked to secondary effects in concentrations of other elements such as Fe
OsZIP7a~OsZIP7 , ZN , Physiological responses of rice Oryza sativa L. oszip7 loss-of-function plants exposed to varying Zn concentrations , Our data suggest that OsZIP7 is important for Zn homeostasis under physiological Zn concentrations, and that Fe homeostasis might be affected due to loss of function of OsZIP7
OsMTI2B~OsMT2c , ZN , Two metallothionein genes highly expressed in rice nodes are involved in distribution of Zn to the grain , Knockout of either OsMT2b or OsMT2c increased zinc (Zn) accumulation in the nodes, but decreased Zn distribution to the panicle, resulting in decreased grain yield
OsMTI2B~OsMT2c , ZN , Two metallothionein genes highly expressed in rice nodes are involved in distribution of Zn to the grain , Both OsMT2b and OsMT2c showed binding ability with Zn, whereas only OsMT2b showed binding ability with Cu in yeast
OsMTI2B~OsMT2c , ZN , Two metallothionein genes highly expressed in rice nodes are involved in distribution of Zn to the grain , Our results suggest that both OsMT2b and OsMT2c play an important role mainly in the distribution of Zn to grain through chelation and subsequent transport of Zn in the phloem in rice
OsZIP4 , ZN , A transporter for delivering zinc to the developing tiller bud and panicle in rice , The expression of OsZIP4 was highly detected in TB and nodes, and was induced by Zn deficiency
OsZIP4 , ZN , A transporter for delivering zinc to the developing tiller bud and panicle in rice , Mutation of OsZIP4 did not affect the total Zn uptake, but altered Zn distribution; less Zn was delivered to TB and new leaf, but more Zn was retained in the basal stems at the vegetative growth stage
OsZIP4 , ZN , A transporter for delivering zinc to the developing tiller bud and panicle in rice , At the reproductive stage, mutation of OsZIP4 resulted in delayed panicles development, which is associated with decreased Zn distribution to the panicles
OsZIP4 , ZN , A transporter for delivering zinc to the developing tiller bud and panicle in rice , Collectively, OsZIP4 is involved in transporting Zn to the phloem of DVBs in the nodes for subsequent distribution to TBs and other developing tissues
OsPht1;2~OsPT2 , ZN , High level of zinc triggers phosphorus starvation by inhibiting root-to-shoot translocation and preferential distribution of phosphorus in rice plants , Our results showed that high level of Zn decreased the rice biomass and yield production, and inhibited the root-to-shoot translocation and distribution of P into new leaves by down-regulating P transporter genes OsPT2 and OsPT8 in shoot, which was controlled by OsPHR2-OsmiR399-OsPHO2 module
OsPht1;2~OsPT2 , ZN , High level of zinc triggers phosphorus starvation by inhibiting root-to-shoot translocation and preferential distribution of phosphorus in rice plants , High Zn supply triggered P starvation signal in root, thereafter increased the activities of both root-endogenous and -secreted acid phosphatase to release more Pi, and induced the expression OsPT2 and OsPT8 to uptake more P for plant growth
OsPht1;8~OsPT8 , ZN , High level of zinc triggers phosphorus starvation by inhibiting root-to-shoot translocation and preferential distribution of phosphorus in rice plants , Our results showed that high level of Zn decreased the rice biomass and yield production, and inhibited the root-to-shoot translocation and distribution of P into new leaves by down-regulating P transporter genes OsPT2 and OsPT8 in shoot, which was controlled by OsPHR2-OsmiR399-OsPHO2 module
OsPht1;8~OsPT8 , ZN , High level of zinc triggers phosphorus starvation by inhibiting root-to-shoot translocation and preferential distribution of phosphorus in rice plants , High Zn supply triggered P starvation signal in root, thereafter increased the activities of both root-endogenous and -secreted acid phosphatase to release more Pi, and induced the expression OsPT2 and OsPT8 to uptake more P for plant growth
OsZIP11 , ZN , OsZIP11 is a trans-Golgi-residing transporter required for rice iron accumulation and development. , Transcripts of OsZIP11 were significantly induced under Fe but not under zinc (Zn), copper (Cu) or manganese (Mn) deficiency
OsNAC15 , ZN , OsNAC15 Regulates Tolerance to Zinc Deficiency and Cadmium by Binding to OsZIP7 and OsZIP10 in Rice. , OsNAC15 expresses in all tissues of different developmental stages, and is repressed by Zn deficiency and induced by Cd stress
OsNAC15 , ZN , OsNAC15 Regulates Tolerance to Zinc Deficiency and Cadmium by Binding to OsZIP7 and OsZIP10 in Rice. , Expression analysis of rice ZIP family genes suggested that the knockout of OsNAC15 activates or inhibits their transcriptions under Zn deficiency or Cd stress conditions
OsNAC5 , ZN , Enhanced expression of OsNAC5 leads to up-regulation of OsNAC6 and changes rice Oryza sativa L. ionome. , Ionomic analysis of leaves and seeds from the OsNAC5 enhanced expression line revealed lower Fe and Zn concentrations in leaves and higher Fe concentrations in seeds than in WT plants, further suggesting that OsNAC5 may be involved in regulating the ionome in rice plants
OsNAS3 , ZN , Concomitant Activation of OsNAS2 and OsNAS3 Contributes to the Enhanced Accumulation of Iron and Zinc in Rice. , Our research suggests that simultaneous activation of OsNAS2 and OsNAS3 can enhance Fe and Zn accumulation in rice grains while also increasing plant tolerance to growing situations with metal deficiency and excess metal availability
OsNAS2 , ZN , Concomitant Activation of OsNAS2 and OsNAS3 Contributes to the Enhanced Accumulation of Iron and Zinc in Rice. , Our research suggests that simultaneous activation of OsNAS2 and OsNAS3 can enhance Fe and Zn accumulation in rice grains while also increasing plant tolerance to growing situations with metal deficiency and excess metal availability
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Z15
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os05g12680
Information
Publication
Genbank accession number
Key message
The expression of Z15 is induced by moderate low temperature (18<U+2009>C)
The mutation of Z15 influenced the expression of two downstream genes, OsWRKY71 and OsMYB4, that were responsive to moderate low temperature
The results show that Z15 plays a crucial role in the early stages of the response to moderate low temperature in rice
Further study indiceted that Z15 plays a crucial role in the early stages of the response to moderate low temperature in rice
Subcellular localization analysis indicates that Z15 and z15 are localized on the plasma membrane
Connection
Osmyb4 , Z15 , Zebra leaf 15, a receptor-like protein kinase involved in moderate low temperature signaling pathway in rice. , The mutation of Z15 influenced the expression of two downstream genes, OsWRKY71 and OsMYB4, that were responsive to moderate low temperature
OsWRKY71 , Z15 , Zebra leaf 15, a receptor-like protein kinase involved in moderate low temperature signaling pathway in rice. , The mutation of Z15 influenced the expression of two downstream genes, OsWRKY71 and OsMYB4, that were responsive to moderate low temperature
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ZEP1,OsZEP
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os04g37960
Information
Publication
OsAM1 is required for leptotene-zygotene transition in rice , 2011, Cell Res.
ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , 2012, J Cell Sci.
OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , 2011, Plant J.
The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , 2012, Plant J.
The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice , 2010, Plant Cell.
Central region component1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice , 2013, Plant Cell.
OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , 2011, Plant Physiol.
OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice , 2010, Chromosoma.
The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages , 2013, Plant Mol Biol.
Rice OsBRCA2 Is Required for DNA Double-Strand Break Repair in Meiotic Cells , 2020, Front Plant Sci.
Cia Zeaxanthin Biosynthesis, OsZEP and OsVDE Regulate Striped Leaves Occurring in Response to Deep Transplanting of Rice. , 2022, Int J Mol Sci.
Genbank accession number
Key message
In the absence of OsAM1, many other critical meiotic components, including PAIR2, ZEP1 and OsMER3, could not be correctly installed onto chromosomes
The expression levels of the drought-responsive genes RD22, SODA1, bZIP46 and POD, as well as the ABA synthetic gene ZEP1 were up-regulated in the OsDIL-overexpression lines but the ABA degradation gene ABAOX3 was down-regulated
In addition, ZEP1 is reloaded onto chromosomes in early microspores as the chromosome decondense, suggesting that ZEP1 might have other biological functions during this process
The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice
Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
In contrast, in pair2, Osmer3 and zep1 mutants, OsAM1 could be loaded normally, suggesting that OsAM1 plays a fundamental role in building the proper chromosome structure at the beginning of meiosis
Carotenoids enter the xanthophyll cycle, and the metabolites that differentially accumulate in the striped leaves include zeaxanthin and its derivatives for photooxidative stress protection, driven by the upregulated expression of OsZEP
Connection
OsDIL~OsLTP6 , ZEP1~OsZEP , The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages , The expression levels of the drought-responsive genes RD22, SODA1, bZIP46 and POD, as well as the ABA synthetic gene ZEP1 were up-regulated in the OsDIL-overexpression lines but the ABA degradation gene ABAOX3 was down-regulated
OsAREB8~OsAREB1~OsbZIP46~OsABF2~ABL1 , ZEP1~OsZEP , The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages , The expression levels of the drought-responsive genes RD22, SODA1, bZIP46 and POD, as well as the ABA synthetic gene ZEP1 were up-regulated in the OsDIL-overexpression lines but the ABA degradation gene ABAOX3 was down-regulated
OsAM1 , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In the absence of OsAM1, many other critical meiotic components, including PAIR2, ZEP1 and OsMER3, could not be correctly installed onto chromosomes
OsAM1 , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In contrast, in pair2, Osmer3 and zep1 mutants, OsAM1 could be loaded normally, suggesting that OsAM1 plays a fundamental role in building the proper chromosome structure at the beginning of meiosis
PAIR2 , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In the absence of OsAM1, many other critical meiotic components, including PAIR2, ZEP1 and OsMER3, could not be correctly installed onto chromosomes
PAIR2 , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In contrast, in pair2, Osmer3 and zep1 mutants, OsAM1 could be loaded normally, suggesting that OsAM1 plays a fundamental role in building the proper chromosome structure at the beginning of meiosis
MER3~RCK , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In the absence of OsAM1, many other critical meiotic components, including PAIR2, ZEP1 and OsMER3, could not be correctly installed onto chromosomes
MER3~RCK , ZEP1~OsZEP , OsAM1 is required for leptotene-zygotene transition in rice , In contrast, in pair2, Osmer3 and zep1 mutants, OsAM1 could be loaded normally, suggesting that OsAM1 plays a fundamental role in building the proper chromosome structure at the beginning of meiosis
MER3~RCK , ZEP1~OsZEP , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , Here, we identify the rice ZIP4 homolog, a member of the ZMM gene group, and explore its relationship with two other characterized ZMM genes, MER3 and ZEP1
MER3~RCK , ZEP1~OsZEP , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , Although zep1 alone gives an increased chiasma number, both zip4 zep1 and mer3 zep1 show a much lower chiasma number than the zip4 or mer3 single mutants
MER3~RCK , ZEP1~OsZEP , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , These results imply that the normal functions of ZIP4 and MER3 are required for the regulation of COs by ZEP1
ZEP1~OsZEP , ZIP4~SPO22 , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , Here, we identify the rice ZIP4 homolog, a member of the ZMM gene group, and explore its relationship with two other characterized ZMM genes, MER3 and ZEP1
ZEP1~OsZEP , ZIP4~SPO22 , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , Although zep1 alone gives an increased chiasma number, both zip4 zep1 and mer3 zep1 show a much lower chiasma number than the zip4 or mer3 single mutants
ZEP1~OsZEP , ZIP4~SPO22 , ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis , These results imply that the normal functions of ZIP4 and MER3 are required for the regulation of COs by ZEP1
OsAM1 , ZEP1~OsZEP , OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
OsRad21-4~OsREC8 , ZEP1~OsZEP , OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
PAIR2 , ZEP1~OsZEP , OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
MER3~RCK , ZEP1~OsZEP , OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
OsSGO1 , ZEP1~OsZEP , OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis , Finally, we found that the centromeric localization of OsSGO1 depends on OsAM1, not other meiotic proteins such as OsREC8, PAIR2, OsMER3, or ZEP1
OsRad21-4~OsREC8 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
OsRad21-4~OsREC8 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
OsSPO11-1~OsTOP6A1 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
PAIR2 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
PAIR2 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
PAIR3 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
OsCOM1 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
OsCOM1 , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
MER3~RCK , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in Oscom1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal
MER3~RCK , ZEP1~OsZEP , The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis , Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants
PAIR2 , ZEP1~OsZEP , The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice , Although PAIR2 and MER3 were loaded normally in zep1, their dissociation was delayed severely compared with the wild type
MER3~RCK , ZEP1~OsZEP , The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice , Although PAIR2 and MER3 were loaded normally in zep1, their dissociation was delayed severely compared with the wild type
CRC1 , ZEP1~OsZEP , Central region component1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice , CRC1 colocalizes with ZEP1, the rice SC transverse filament protein, to the central region of SCs in a mutually dependent fashion
CRC1 , ZEP1~OsZEP , Central region component1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice , Consistent with this colocalization, CRC1 interacts with ZEP1 in yeast two-hybrid assays
OsRad21-4~OsREC8 , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , Immunolocalization analyses revealed that the loading of PAIR2, PAIR3, OsMER3, and ZEP1 all depended on OsREC8
OsRad21-4~OsREC8 , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , By contrast, the presence of the OsREC8 signal in pair2, pair3, Osmer3, and zep1 mutants indicated that the loading of OsREC8 did not rely on these four proteins
PAIR2 , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , Immunolocalization analyses revealed that the loading of PAIR2, PAIR3, OsMER3, and ZEP1 all depended on OsREC8
PAIR2 , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , By contrast, the presence of the OsREC8 signal in pair2, pair3, Osmer3, and zep1 mutants indicated that the loading of OsREC8 did not rely on these four proteins
MER3~RCK , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , Immunolocalization analyses revealed that the loading of PAIR2, PAIR3, OsMER3, and ZEP1 all depended on OsREC8
MER3~RCK , ZEP1~OsZEP , OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis , By contrast, the presence of the OsREC8 signal in pair2, pair3, Osmer3, and zep1 mutants indicated that the loading of OsREC8 did not rely on these four proteins
XRCC3 , ZEP1~OsZEP , XRCC3 is essential for proper double-strand break repair and homologous recombination in rice meiosis. , Moreover, abnormal chromosome localization of RAD51C, DMC1, ZEP1, ZIP4, and MER3 was observed in xrcc3
OsDMC1~DMC1B~OsDMC1B , ZEP1~OsZEP , OsDMC1 is not required for homologous pairing in rice meiosis. , Moreover, OsDMC1 was not detected in pairing-defective mutants, such as pair2, pair3, Oscom1 and Osrad51c, while it was loaded onto meiotic chromosomes in zep1, Osmer3, Oszip4 and Oshei10
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ZFP15
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os03g60570
Information
Publication
Genbank accession number
Key message
Rice ZFP15 gene encoding for a novel C2H2-type zinc finger protein lacking DLN box, is regulated by spike development but not by abiotic stresses
Besides, ZFP15 was shown to accumulate much more in flowering spike than in immature spike
Connection
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ZFP182,ZOS3-21
2015-01-20T00:00:00+00:00
Wen Yao (姚文)
https://funricegenes.github.io//LOC_Os03g60560
Information
Publication
Genbank accession number
Key message
Overexpression of ZFP182 significantly enhanced multiple abiotic stress tolerances, including salt, cold and drought tolerances in transgenic rice
The expression analysis showed that ZFP182 gene was constitutively expressed in leaves, culms, roots and spikes at the adult rice plants, and markedly induced in the seedlings by cold (4 degrees C), 150 mM NaCl and 0
Nipponbare) C(2) H(2) -type ZFP ZFP182 in ABA-induced antioxidant defense and the relationship between ZFP182 and two rice MAPKs, OsMPK1 and OsMPK5 in ABA signaling were investigated
These results indicate that ZFP182 is required for ABA-induced antioxidant defense and the expression of ZFP182 is regulated by rice MAPKs in ABA signaling
The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice
Expression of ZFP182 in transgenic tobacco and overexpression in rice increased plant tolerance to salt stress
These results demonstrated that ZFP182 might be involved in plant responses to salt stress
ABA treatment induced the increases in the expression of ZFP182, OsMPK1 and OsMPK5, and the activities of superoxide dismutase (SOD) and ascorbate peroxidase (APX) in rice leaves
Besides, OsMPK1 and OsMPK5 were shown to be required for the up-regulation in the expression of ZFP182 in ABA signaling, but ZFP182 did not mediate the ABA-induced up-regulation in the expression of OsMPK1 and OsMPK5
Connection
OsMSRMK2~OsMAP1~OsMPK5~OsMAPK2~OsMAPK5~OsBIMK1~OsMPK3 , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , Nipponbare) C(2) H(2) -type ZFP ZFP182 in ABA-induced antioxidant defense and the relationship between ZFP182 and two rice MAPKs, OsMPK1 and OsMPK5 in ABA signaling were investigated
OsMSRMK2~OsMAP1~OsMPK5~OsMAPK2~OsMAPK5~OsBIMK1~OsMPK3 , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , ABA treatment induced the increases in the expression of ZFP182, OsMPK1 and OsMPK5, and the activities of superoxide dismutase (SOD) and ascorbate peroxidase (APX) in rice leaves
OsMSRMK2~OsMAP1~OsMPK5~OsMAPK2~OsMAPK5~OsBIMK1~OsMPK3 , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , The transient gene expression analysis and the transient RNA interference (RNAi) analysis in protoplasts showed that ZFP182, OsMPK1 and OsMPK5 are involved in ABA-induced up-regulation in the activities of SOD and APX
OsMSRMK2~OsMAP1~OsMPK5~OsMAPK2~OsMAPK5~OsBIMK1~OsMPK3 , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , Besides, OsMPK1 and OsMPK5 were shown to be required for the up-regulation in the expression of ZFP182 in ABA signaling, but ZFP182 did not mediate the ABA-induced up-regulation in the expression of OsMPK1 and OsMPK5
OsMPK1~OsMAPK6~OsSIPK , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , Nipponbare) C(2) H(2) -type ZFP ZFP182 in ABA-induced antioxidant defense and the relationship between ZFP182 and two rice MAPKs, OsMPK1 and OsMPK5 in ABA signaling were investigated
OsMPK1~OsMAPK6~OsSIPK , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , ABA treatment induced the increases in the expression of ZFP182, OsMPK1 and OsMPK5, and the activities of superoxide dismutase (SOD) and ascorbate peroxidase (APX) in rice leaves
OsMPK1~OsMAPK6~OsSIPK , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , The transient gene expression analysis and the transient RNA interference (RNAi) analysis in protoplasts showed that ZFP182, OsMPK1 and OsMPK5 are involved in ABA-induced up-regulation in the activities of SOD and APX
OsMPK1~OsMAPK6~OsSIPK , ZFP182~ZOS3-21 , The C2H2-type zinc finger protein ZFP182 is involved in abscisic acid-induced antioxidant defense in rice , Besides, OsMPK1 and OsMPK5 were shown to be required for the up-regulation in the expression of ZFP182 in ABA signaling, but ZFP182 did not mediate the ABA-induced up-regulation in the expression of OsMPK1 and OsMPK5
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