- Information
- Symbol: OsCLF,SDG711
- MSU: LOC_Os06g16390
- RAPdb: Os06g0275500
- Publication
- Expression, imprinting, and evolution of rice homologs of the polycomb group genes, 2009, Mol Plant.
- Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., 2015, Sci Rep.
- Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., 2016, Plant J.
- Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., 2017, Plant Sci.
- Transcriptional and post-transcriptional regulation of heading date in rice, 2020, New Phytol.
- SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other HistoneModifications, 2021, Rice (N Y).
- Genbank accession number
- Key message
- NA
- The expression of SDG711 and SDG718 is induced by LD and SD, respectively.
- OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
- Reduced cell expansion and cell division of stem caused significant reduction of stem length during mature period of OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants
- To determine how PcG genes regulate plant height, we investigated the phenotypes of the emf2b mutant and OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants; they all exhibited dwarf phenotype
- Therefore, we speculated that these PcG genes, OsFIE2, OsCLF and OsEMF2b, may work as a PRC2 to regulate rice height
- SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other HistoneModifications
- SDG711 is a histone H3K27me2/3 transmethylase in rice, a homolog of CLF in Arabidopsis, and plays key roles in regulating flowering time and panicle development
- In this work, we investigated the role of SDG711 in rice seed development
- Overexpression and downregulation of SDG711 lead to a decrease and increase in the expression level of genes related to starch accumulation, resulting in smaller seeds or even seed abortion
- ChIP assay showed that SDG711-mediated H3K27me3 changed significantly in genes related to endosperm development, and SDG711 can directly bind to the gene body region of several starch synthesis genes and amylase genes
- Connection
- OsCLF~SDG711, OsiEZ1~OsSET1~SDG718, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsFIE2, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsEMF2b, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsEMF2a, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsFIE1~Epi-df, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- Ehd1, OsCLF~SDG711, , SDG711 was also found to be involved in the repression of Ehd1 in LD.
- Ehd1, OsCLF~SDG711, , SDG711 was shown to directly target to OsLF and Ehd1 loci to mediate H3K27me3 and gene repression.
- JMJ703~OsJMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., Thousands of genes gained or lost H3K27me3 in IM, and downregulation of the H3K27 methyltransferase gene SET DOMAIN GROUP 711 (SDG711) or mutation of the H3K4 demethylase gene JMJ703 eliminated the increase of H3K27me3 in many genes
- JMJ703~OsJMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., Double knockdown/knockout of SDG711 and JMJ703 further reduced panicle size
- JMJ703~OsJMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., These results suggest that SDG711 and JMJ703 have agonistic functions in reprogramming the H3K27me3/H3K4me3 ratio and modulating gene expression in the IM
- CHR729~OsCHD3~CRL6~RFS, OsCLF~SDG711, Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., Here we show that maintenance of a stably hypomethylated active epiallele in rice required a CHD3 protein (CHR729) and that over-expression of an H3K4me3 demethylase (JMJ703) or H3K27me3 methyltransferase (SDG711) could stably resilence the epiallele
- JMJ703~OsJMJ703, OsCLF~SDG711, Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., Here we show that maintenance of a stably hypomethylated active epiallele in rice required a CHD3 protein (CHR729) and that over-expression of an H3K4me3 demethylase (JMJ703) or H3K27me3 methyltransferase (SDG711) could stably resilence the epiallele
- OsCLF~SDG711, OsFIE1~Epi-df, Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
- OsCLF~SDG711, OsiEZ1~OsSET1~SDG718, Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF.
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., To determine how PcG genes regulate plant height, we investigated the phenotypes of the emf2b mutant and OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants; they all exhibited dwarf phenotype
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Reduced cell expansion and cell division of stem caused significant reduction of stem length during mature period of OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., H3K27me3-modified sites were observed in 95 of the 109 up-regulated genes, and some of them were up-regulated in OsFIE2, OsCLF and OsEMF2b RNAi transgenic plants, and their H3K27me3 levels were reduced in emf2b
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Moreover, OsEMF2b interacted with OsCLF
- OsCLF~SDG711, OsEMF2b, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Therefore, we speculated that these PcG genes, OsFIE2, OsCLF and OsEMF2b, may work as a PRC2 to regulate rice height
- OsCLF~SDG711, OsFIE2, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF.
- OsCLF~SDG711, OsFIE2, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., To determine how PcG genes regulate plant height, we investigated the phenotypes of the emf2b mutant and OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants; they all exhibited dwarf phenotype
- OsCLF~SDG711, OsFIE2, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Reduced cell expansion and cell division of stem caused significant reduction of stem length during mature period of OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants
- OsCLF~SDG711, OsFIE2, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., H3K27me3-modified sites were observed in 95 of the 109 up-regulated genes, and some of them were up-regulated in OsFIE2, OsCLF and OsEMF2b RNAi transgenic plants, and their H3K27me3 levels were reduced in emf2b
- OsCLF~SDG711, OsFIE2, Regulation of plant height in rice by the Polycomb group genes OsEMF2b, OsFIE2 and OsCLF., Therefore, we speculated that these PcG genes, OsFIE2, OsCLF and OsEMF2b, may work as a PRC2 to regulate rice height
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